Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919292.1_cds_XP_016468517.1_61147
CDS Infomation

[gene=LOC107791044] [db_xref=GeneID:107791044] [protein=FRIGIDA-like protein 4a] [protein_id=XP_016468517.1] [location=complement(join(35083..35571,36119..36294,37970..38855))] [gbkey=CDS]
Sequence

ATGGGTTCACTCGCCGATCGCGGCGAACTCGACTCGGTGGCGCCGCCGCCGAGTTTCGAC
GACTTCCAGCGCCAAACTTCTTTAATGACAAGCTGCACACTCCTGTGGAAAGAGCTCTCC
GATCACTTCACTTCACTCGAACAAGACATCCTCAAGAAATCCGAAGCCTTAAAAGCTAAA
ATCCAAACCCTAGATTCCGAAACCAAAGCATCCCTCGAAGTCCTGGAAAAGCGCGAGAAT
TCAATGAACGTTTCACTCTCAATTTCTCTTCAGAAGGTTCTCGAAAACAAGCAAGCTGCT
ATTTTAGCCCTAGATGAGGGTGCAGAACAACCCGAAGTCGATGACTCTACTGGATTGTAT
CTAAAATTGAAGGGCTTTTGTGTTAAGATGGATTCTAGAAGCTTCTGGAGGTTTTTAATT
GTAAAAAAGAAGGATTTGGATTCACTTAGGGTTGAAATACCGAAAGCATTAGGAGACTGC
GTGGATCCGCCGAGGTTCGTGTTGGAATCGATATCCGAGGTGTTTCCAGAGGATAAAAGG
CCCAACCCAACCCTTGATTTGGGCTGGGCCTGTGTTTTGATGTTGGAGTCTTTGATTCCA
GTTATGATGGACCCGGTTTTGGGAAATGAGAGGAAATTGGTGACGCCGAGTGTTAAGGAT
AAGGCCAATGAGATAGCGGAGATATGGAAGAGGAGCTTGGATGAAAGAGGAGGGATTGAG
AATGTGAAGACGCCAGATGTGCATACTTTCTTGCAGCATTTGGTAACTTTTGGGATAGTC
AAGGATGAGGATTTTGATTTGTACAGGAAACTTGTTGTTGGGTCTGCTTGGAGGAAACAG
ATGCCTAAATTGGCTGTCTCTCTTGGACTTGGTGATAAAATGCCTGAAATGATTGAAGAA
TTAATCAGCCGAGGACAGCAAGTTGATGCCGTACATTTCACTTATGAAGTTGGACTTGCT
GATAGGTTCCCTCCTGTTCCTCTTCTGAAAGCTTACCTAAAAGATGCGAAAAAAGCTGCT
ACTGCAATTCTGGAAGACCCAAATAATTCTGGTCGAGCTGCGCATCTAGCTGCAAAGAAA
GAGCAATCAGCGATTCGTTCTGTCCTTAAGTGTATTGAAGAATACAAGCTTGAGGCTGAA
TTCCCTCCAGAAAACCTTAAAAAGCAGCTTGAGCAGTCGGAGAAGCCCAAGAATGAGAAA
AAGAGGCCAGCTGCTGTACCAGCAAATAAAAGAACGAGAGCCAGTAACGTTGGTCCTATG
CCTCCTGCTAAGGCAGGCCGTTCAACAAATGCCTATGTATCATCTTTCCCAGTAGCCCCG
GCATTTGTTAGGTCTCCCTCACACACCCAATACCCTGCTGCAGTTCCAGCATATGCTGCA
CCACCTGCAATCTACGGTAACAGGAGCCCGCCTTATCCTTACTCTCCAGAAGCTGCCCCA
TATCCAGGCACCCCAGTGAACTACTCTCCAGGCACCCCAGTGAACTATTCTCCATATGGT
GGCTATGGCAATGGGATGGCCCCAGCTTACCAGCAAGTTTACTACCGATAG

Peptide Sequence

PEP ID

XP_016468517.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 4a [Nicotiana tabacum]
Sequence

MGSLADRGELDSVAPPPSFDDFQRQTSLMTSCTLLWKELSDHFTSLEQDILKKSEALKAK
IQTLDSETKASLEVLEKRENSMNVSLSISLQKVLENKQAAILALDEGAEQPEVDDSTGLY
LKLKGFCVKMDSRSFWRFLIVKKKDLDSLRVEIPKALGDCVDPPRFVLESISEVFPEDKR
PNPTLDLGWACVLMLESLIPVMMDPVLGNERKLVTPSVKDKANEIAEIWKRSLDERGGIE
NVKTPDVHTFLQHLVTFGIVKDEDFDLYRKLVVGSAWRKQMPKLAVSLGLGDKMPEMIEE
LISRGQQVDAVHFTYEVGLADRFPPVPLLKAYLKDAKKAATAILEDPNNSGRAAHLAAKK
EQSAIRSVLKCIEEYKLEAEFPPENLKKQLEQSEKPKNEKKRPAAVPANKRTRASNVGPM
PPAKAGRSTNAYVSSFPVAPAFVRSPSHTQYPAAVPAYAAPPAIYGNRSPPYPYSPEAAP
YPGTPVNYSPGTPVNYSPYGGYGNGMAPAYQQVYYR

Transcript Sequence

Gene sequence data has not been registered.